subgraph feature
PipeNet: Question Answering with Semantic Pruning over Knowledge Graphs
Su, Ying, Zhang, Jipeng, Song, Yangqiu, Zhang, Tong
It is well acknowledged that incorporating explicit knowledge graphs (KGs) can benefit question answering. Existing approaches typically follow a grounding-reasoning pipeline in which entity nodes are first grounded for the query (question and candidate answers), and then a reasoning module reasons over the matched multi-hop subgraph for answer prediction. Although the pipeline largely alleviates the issue of extracting essential information from giant KGs, efficiency is still an open challenge when scaling up hops in grounding the subgraphs. In this paper, we target at finding semantically related entity nodes in the subgraph to improve the efficiency of graph reasoning with KG. We propose a grounding-pruning-reasoning pipeline to prune noisy nodes, remarkably reducing the computation cost and memory usage while also obtaining decent subgraph representation. In detail, the pruning module first scores concept nodes based on the dependency distance between matched spans and then prunes the nodes according to score ranks. To facilitate the evaluation of pruned subgraphs, we also propose a graph attention network (GAT) based module to reason with the subgraph data. Experimental results on CommonsenseQA and OpenBookQA demonstrate the effectiveness of our method.
Unifying Graph Embedding Features with Graph Convolutional Networks for Skeleton-based Action Recognition
Yang, Dong, Li, Monica Mengqi, Fu, Hong, Fan, Jicong, Zhang, Zhao, Leung, Howard
Combining skeleton structure with graph convolutional networks has achieved remarkable performance in human action recognition. Since current research focuses on designing basic graph for representing skeleton data, these embedding features contain basic topological information, which cannot learn more systematic perspectives from skeleton data. In this paper, we overcome this limitation by proposing a novel framework, which unifies 15 graph embedding features into the graph convolutional network for human action recognition, aiming to best take advantage of graph information to distinguish key joints, bones, and body parts in human action, instead of being exclusive to a single feature or domain. Additionally, we fully investigate how to find the best graph features of skeleton structure for improving human action recognition. Besides, the topological information of the skeleton sequence is explored to further enhance the performance in a multi-stream framework. Moreover, the unified graph features are extracted by the adaptive methods on the training process, which further yields improvements. Our model is validated by three large-scale datasets, namely NTU-RGB+D, Kinetics and SYSU-3D, and outperforms the state-of-the-art methods. Overall, our work unified graph embedding features to promotes systematic research on human action recognition.
Wu
In this paper, we propose to represent and classify complicated objects. In order to represent the objects, we propose a multi-graph-view model which uses graphs constructed from multiple graph-views to represent an object. In addition, a bag based multi-graph model is further used to relax labeling by only requiring one label for a bag of graphs, which represent one object. In order to learn classification models, we propose a multi-graph-view bag learning algorithm (MGVBL), which aims to explore subgraph features from multiple graph-views for learning. By enabling a joint regularization across multiple graph-views, and enforcing labeling constraints at the bag and graph levels, MGVBL is able to discover most effective subgraph features across all graph-views for learning. Experiments on real-world learning tasks demonstrate the performance of MGVBL for complicated object classification.
Jointly learning relevant subgraph patterns and nonlinear models of their indicators
Shirakawa, Ryo, Yokoyama, Yusei, Okazaki, Fumiya, Takigawa, Ichigaku
Classification and regression in which the inputs are graphs of arbitrary size and shape have been paid attention in various fields such as computational chemistry and bioinformatics. Subgraph indicators are often used as the most fundamental features, but the number of possible subgraph patterns are intractably large due to the combinatorial explosion. We propose a novel efficient algorithm to jointly learn relevant subgraph patterns and nonlinear models of their indicators. Previous methods for such joint learning of subgraph features and models are based on search for single best subgraph features with specific pruning and boosting procedures of adding their indicators one by one, which result in linear models of subgraph indicators. In contrast, the proposed approach is based on directly learning regression trees for graph inputs using a newly derived bound of the total sum of squares for data partitions by a given subgraph feature, and thus can learn nonlinear models through standard gradient boosting. An illustrative example we call the Graph-XOR problem to consider nonlinearity, numerical experiments with real datasets, and scalability comparisons to naive approaches using explicit pattern enumeration are also presented.
Mining Brain Networks using Multiple Side Views for Neurological Disorder Identification
Cao, Bokai, Kong, Xiangnan, Zhang, Jingyuan, Yu, Philip S., Ragin, Ann B.
Mining discriminative subgraph patterns from graph data has attracted great interest in recent years. It has a wide variety of applications in disease diagnosis, neuroimaging, etc. Most research on subgraph mining focuses on the graph representation alone. However, in many real-world applications, the side information is available along with the graph data. For example, for neurological disorder identification, in addition to the brain networks derived from neuroimaging data, hundreds of clinical, immunologic, serologic and cognitive measures may also be documented for each subject. These measures compose multiple side views encoding a tremendous amount of supplemental information for diagnostic purposes, yet are often ignored. In this paper, we study the problem of discriminative subgraph selection using multiple side views and propose a novel solution to find an optimal set of subgraph features for graph classification by exploring a plurality of side views. We derive a feature evaluation criterion, named gSide, to estimate the usefulness of subgraph patterns based upon side views. Then we develop a branch-and-bound algorithm, called gMSV, to efficiently search for optimal subgraph features by integrating the subgraph mining process and the procedure of discriminative feature selection. Empirical studies on graph classification tasks for neurological disorders using brain networks demonstrate that subgraph patterns selected by the multi-side-view guided subgraph selection approach can effectively boost graph classification performances and are relevant to disease diagnosis.
Multi-Graph-View Learning for Complicated Object Classification
Wu, Jia (University of Technology, Sydney) | Pan, Shirui (University of Technology, Sydney) | Zhu, Xingquan (Florida Atlantic University) | Cai, Zhihua (China University of Geosciences, Wuhan) | Zhang, Chengqi (University of Technology, Sydney)
In this paper, we propose to represent and classify complicated objects. In order to represent the objects, we propose a multi-graph-view model which uses graphs constructed from multiple graph-views to represent an object. In addition, a bag based multi-graph model is further used to relax labeling by only requiring one label for a bag of graphs, which represent one object. In order to learn classification models, we propose a multi-graph-view bag learning algorithm (MGVBL), which aims to explore subgraph features from multiple graph-views for learning. By enabling a joint regularization across multiple graph-views, and enforcing labeling constraints at the bag and graph levels, MGVBL is able to discover most effective subgraph features across all graph-views for learning. Experiments on real-world learning tasks demonstrate the performance of MGVBL for complicated object classification.
Sparse Learning over Infinite Subgraph Features
Takigawa, Ichigaku, Mamitsuka, Hiroshi
We present a supervised-learning algorithm from graph data (a set of graphs) for arbitrary twice-differentiable loss functions and sparse linear models over all possible subgraph features. To date, it has been shown that under all possible subgraph features, several types of sparse learning, such as Adaboost, LPBoost, LARS/LASSO, and sparse PLS regression, can be performed. Particularly emphasis is placed on simultaneous learning of relevant features from an infinite set of candidates. We first generalize techniques used in all these preceding studies to derive an unifying bounding technique for arbitrary separable functions. We then carefully use this bounding to make block coordinate gradient descent feasible over infinite subgraph features, resulting in a fast converging algorithm that can solve a wider class of sparse learning problems over graph data. We also empirically study the differences from the existing approaches in convergence property, selected subgraph features, and search-space sizes. We further discuss several unnoticed issues in sparse learning over all possible subgraph features.
Discriminative Feature Selection for Uncertain Graph Classification
Kong, Xiangnan, Yu, Philip S., Wang, Xue, Ragin, Ann B.
Mining discriminative features for graph data has attracted much attention in recent years due to its important role in constructing graph classifiers, generating graph indices, etc. Most measurement of interestingness of discriminative subgraph features are defined on certain graphs, where the structure of graph objects are certain, and the binary edges within each graph represent the "presence" of linkages among the nodes. In many real-world applications, however, the linkage structure of the graphs is inherently uncertain. Therefore, existing measurements of interestingness based upon certain graphs are unable to capture the structural uncertainty in these applications effectively. In this paper, we study the problem of discriminative subgraph feature selection from uncertain graphs. This problem is challenging and different from conventional subgraph mining problems because both the structure of the graph objects and the discrimination score of each subgraph feature are uncertain. To address these challenges, we propose a novel discriminative subgraph feature selection method, DUG, which can find discriminative subgraph features in uncertain graphs based upon different statistical measures including expectation, median, mode and phi-probability. We first compute the probability distribution of the discrimination scores for each subgraph feature based on dynamic programming. Then a branch-and-bound algorithm is proposed to search for discriminative subgraphs efficiently. Extensive experiments on various neuroimaging applications (i.e., Alzheimer's Disease, ADHD and HIV) have been performed to analyze the gain in performance by taking into account structural uncertainties in identifying discriminative subgraph features for graph classification.
gRegress: Extracting Features from Graph Transactions for Regression
Ketkar, Nikhil S. (Washington State University) | Holder, Lawrence B. (Washington State University) | Cook, Diane J. (Washington State University)
In this work we propose gRegress, a new algorithm which given set of labeled graphs and a real value associated with each graph extracts the complete set of subgraphs such that a) each subgraph in this set has correlation with the real value above a user-specified threshold and b) each subgraph in this set has correlation with any other subgraph in the set below a user-specified threshold. gRegress incorporates novel pruning mechanisms based on correlation of a subgraph feature with the output and correlation with other subgraph features. These pruning mechanisms lead to significant speedup. Experimental results indicate that in terms of runtime, gRegress substantially outperforms gSpan, often by an order of magnitude while the regression models produced by both approaches have comparable accuracy.